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Pull requests: galaxyproject/galaxy

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292 Open 13,599 Closed
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Pull requests list

Support remote file source hashes area/backend kind/enhancement
#20853 opened Sep 3, 2025 by davelopez • Draft
2 of 4 tasks
25.1
1
3
Put ajs instead of tuple into watch queue area/jobs
#20852 opened Sep 3, 2025 by nuwang Loading…
1 of 4 tasks
25.1
3
Use a streaming based parser (ijson) when setting metadata for biom1 files. area/datatypes area/dependencies
#20851 opened Sep 3, 2025 by ksuderman Loading…
2 of 4 tasks
25.1
OIDC authentication pipeline - allow adding extra steps to the default pipeline area/auth Authentication and authorization area/testing
#20845 opened Sep 2, 2025 by marius-mather Loading…
2 of 4 tasks
25.1
Integration tests updates kind/enhancement
#20844 opened Sep 2, 2025 by nsoranzo Loading…
2 of 4 tasks
25.1
Render Markdown in Dataset Preview area/UI-UX kind/feature
#20843 opened Sep 1, 2025 by itisAliRH Loading…
2 of 4 tasks
25.1
2
Modernize tools in the filters/ dir area/testing area/tools
#20840 opened Aug 29, 2025 by natefoo Loading…
2 of 4 tasks
25.1
10
[25.0] Disable Run Tool button when there are errors area/UI-UX kind/bug
#20839 opened Aug 29, 2025 by ahmedhamidawan Loading…
1 of 4 tasks
25.1
2
Update pytest to v8 area/dependencies
#20838 opened Aug 29, 2025 by nsoranzo • Draft
2 of 4 tasks
1
3
Fix optional numeric column definitions for sample sheets. area/UI-UX area/workflows kind/bug minor
#20830 opened Aug 28, 2025 by jmchilton Loading…
2 tasks done
25.1
Bump jspdf from 2.5.1 to 3.0.2 in /client area/client dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code major
#20828 opened Aug 28, 2025 by dependabot bot Loading… 25.1
[25.0] Fix DOCX detection and add PPTX support area/datatypes kind/bug kind/enhancement
#20827 opened Aug 28, 2025 by arash77 Loading…
1 of 4 tasks
25.1
[25.0] Skip sam metadata if we have too many references area/datatypes area/performance kind/bug
#20820 opened Aug 26, 2025 by mvdbeek Loading…
1 of 4 tasks
25.1
1
Refactor/cleanup admin_cleanup_datasets.py script area/scripts
#20819 opened Aug 26, 2025 by ccoulombe Loading…
1 of 3 tasks
25.1
9
Fix Ipynb datatype sniffer and add unit tests. area/datatypes area/testing
#20811 opened Aug 22, 2025 by ksuderman Loading…
2 of 4 tasks
25.1
1
@jdavcs
Replace json.load() with json_stream.load() area/datatypes area/dependencies
#20802 opened Aug 20, 2025 by ksuderman Loading…
2 of 4 tasks
25.1
16
Implement bare-bones view of sample sheet collections as sheet. area/dataset-collections area/UI-UX kind/enhancement minor
#20798 opened Aug 20, 2025 by jmchilton • Draft
1 of 4 tasks
Vue3? area/admin area/client area/reports area/UI-UX
#20787 opened Aug 19, 2025 by dannon • Draft
1 of 4 tasks
1
fix anndata metadata area/datatypes
#20778 opened Aug 15, 2025 by nilchia Loading…
1 task done
25.1
7
Add ghost virtual webserver for archived htmls area/visualizations feature-request
#20756 opened Aug 10, 2025 by guerler • Draft
1 of 4 tasks
25.1
1
[25.0] add safetensors datatype area/datatypes area/dependencies
#20754 opened Aug 9, 2025 by nilchia Loading…
1 task done
25.1
20
WIP: fix unbounded data loading area/datatypes
#20751 opened Aug 8, 2025 by mvdbeek • Draft
1 of 4 tasks
6
Change Advanced Tool Search to a Tool Discovery View area/UI-UX kind/enhancement kind/feature
#20747 opened Aug 6, 2025 by ahmedhamidawan • Draft
1 of 4 tasks
1
1
[WIP] Add Tags Management to User Preferences area/UI-UX
#20733 opened Aug 4, 2025 by itisAliRH • Draft
1 of 4 tasks
1
Improve cli and slurmcli runner traceability for job status and failure reasons area/jobs
#20717 opened Jul 31, 2025 by selten Loading…
2 of 4 tasks
25.1
6
ProTip! Updated in the last three days: updated:>2025-08-31.