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Adds a constant reservoir diffusion interface for liquid phase domains that simulates diffusive fluxes between the domain and a constant concentration reservoir.

rwest and others added 30 commits July 29, 2024 09:52
The paper is published. It's open access so I figured no need to keep the preprint link.
Removed an invalid field in a Marcus type reaction
in ORR.rms
`cat` is a default Julia function for concatenating
arrays. As a precaution these are renamed to
`catalyst` to avoid conflicts
@ssun30 ssun30 force-pushed the constant_reservoir_diffusion branch 2 times, most recently from 681788c to 4ffdd40 Compare April 15, 2025 00:10
JacksonBurns and others added 12 commits May 23, 2025 14:01
Attempting to Fix the `juliacall` Overhaul on RMG
this interface creates diffusive fluxes between a given domain and a constant concentration reservoir

Some bugfixes by Su:
Fixed undefined variable S
Added missing "export" for ConstantReservoirDiffusion

Co-authored-by: Matt Johnson <mjohnson541@gmail.com>
Co-authored-by: Su Sun <sun.su@northeastern.edu>
fixup: fix assignment to dot addition .+=
@rwest rwest force-pushed the constant_reservoir_diffusion branch from 4ffdd40 to 846c683 Compare July 8, 2025 19:19
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rwest commented Jul 8, 2025

Most of this is in #270 and this should be rebased and merged after that is merged.

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5 participants